Method test_fasta

test/test_core.py:6456–6467

(self, float_type)

    'float': ('float',),
  })
  def test_fasta(self, float_type):
    results = [('1', '''GG\nctt\n\ntgagc\n'''),
               ('20', '''GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTT\ncttBtatcatatgctaKggNcataaaSatgtaaaDcDRtBggDtctttataattcBgtcg\n\ntacgtgtagcctagtgtttgtgttgcgttatagtctatttgtggacacagtatggtcaaa\n\ntgacgtcttttgatctgacggcgttaacaaagatactctg\n'''),
               ('50', '''GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGA\nTCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT\ncttBtatcatatgctaKggNcataaaSatgtaaaDcDRtBggDtctttataattcBgtcg\n\ntactDtDagcctatttSVHtHttKtgtHMaSattgWaHKHttttagacatWatgtRgaaa\n\nNtactMcSMtYtcMgRtacttctWBacgaa\n\nagatactctgggcaacacacatacttctctcatgttgtttcttcggacctttcataacct\n\nttcctggcacatggttagctgcacatcacaggattgtaagggtctagtggttcagtgagc\n\nggaatatcattcgtcggtggtgttaatctatctcggtgtagcttataaatgcatccgtaa\n\ngaatattatgtttatttgtcggtacgttcatggtagtggtgtcgccgatttagacgtaaa\n\nggcatgtatg\n''')]

    orig_src = read_file(test_file('third_party/fasta.cpp'))

    src = orig_src.replace('double', float_type)
    create_file('fasta.cpp', src)
    js_out = self.build('fasta.cpp')
    for arg, output in results:
      self.do_run(js_out, output, args=[arg], no_build=True)

  @needs_non_trapping_float_to_int
  def test_fasta_nontrapping(self):